Schedule

Last updated at Feb 20, 2022

Thursday, 3rd

09:00

Check-in

Anfiteatro CP2 B1

09:30

Opening session

Anfiteatro CP2 B1

10:00

Quantifying gut microbiota-drug-host metabolic interactions

Keynote

Dr. Maria Zimmerman

Anfiteatro CP2 B1

10:45

Coffee Break

CP2

11:15

Health Applications

Oral Communications

Anfiteatro CP2 B1

  • Comunication 1 - Exploring new algorithms to combine genomic information from extant populations and ancient specimens | Authors: Joana C. Ferreira, Farida Alshamali, Luisa Pereira, Veronica Fernandes
  • Comunication 2 - A Validated Proteomics and Genomics Pipeline to Unravel Prostate Cancer Biomarkers | Authors: Tânia Lima, Rita Ferreira, Marina Freitas, Rui Henrique, Rui Vitorino, Margarida Fardilha
  • Comunication 3 - Whole genome sequencing analysis: exploring germline CNV and SNV landscapes | Authors: Marta Ferreira, Joaquin Jurado Maqueda, Francisco Almeida, Rita Monteiro, Celina São José, Carla Oliveira
  • Comunication 4 - Understanding HIV-1 epidemiology and genetic diversity in Brazil | Authors: Ana Santos Pereira, Triunfante V.; Souto B.; Araújo P. M. M., Martins J.; Osório N. S

13:00

Lunch Break

14:30

Common therapeutics induce emergent behaviours in synthetic gut bacterial communities

Keynote

Dr. Sarela Garcia-Santamarina

Anfiteatro CP2 B1

15:15

Machine Learning

Oral Communications

Anfiteatro CP2 B1

  • Comunication 5 - Stable variable selection in penalized regression models: an application to high dimensional genomic data - Alzheimer’s Disease | Authors: Leonor Rodrigues, Ana H. Tavares, Vera Enes, Miguel Pinheiro, Gabriela Moura, Vera Afreixo
  • Comunication 6 - Knowledge Graph Embeddings for ICU readmission prediction | Authors: Ricardo Carvalho, Daniela Oliveira, Catia Pesquita
  • Comunication 7 - Transcriptomic effects of cigarette smoking across human tissues | Authors: Rogério Ribeiro, Raquel García-Pérez, José Cardenosa, Marta Melé & Ferreira P. G.

16:15

Poster Presentations / Coffee Break

CP2

16:45

Bioinformatics applications

Oral Communications

Anfiteatro CP2 B1

  • Comunication 8 - New Insights into the Catalytic Mechanism of Plastic Degrading Enzyme IsPETase: a QM/MM computational study | Authors: Rita P. Magalhães, Henrique S. Fernandes, and Sérgio F. Sousa
  • Comunication 9 - The catalytic mechanism of Pdx2 glutaminase: a QM/MM approach | Authors: André F. Pina, Sérgio F. Sousa, Nuno M. F. S. A. Cerqueira
  • Comunication 10 - Bioinformatic strategies in grapevine genomics, from biodiversity to domestication | Authors: Sara Freitas, Miguel Carneiro, Herlander Azevedo

17:45

End of the Day

19:00

Speed Meeting

20:45

Formal Dinner

Migaitas Restaurant

Friday, 4th

10:00

Streamlining the Design-Build-Test-Learn workflow for bio-based production platforms

Keynote

Dr. Pablo Carbonell

Anfiteatro CP2 B1

10:45

Poster Presentations / Coffee Break

CP2

11:15

Bioinformatics applications

Oral Communications

Anfiteatro CP2 B1

  • Comunication 11 - Drug Target Identification based on the construction of a Genome-scale metabolic model for the human pathogen Candida parapsilosis | Authors: Diogo Couceiro, Romeu Viana, Tiago Carreiro, Oscar Dias, Isabel Rocha, Miguel Cacho Teixeira
  • Comunication 12 - Strain optimization for aromatic amino acids using an Escherichia coli kinetic model | Authors: André Fonseca, Isabel Rocha
  • Comunication 13 - A continous approach for modeling fermentation phases in wine production | Authors: Artai Rodríguez-Moimenta, David Henriques, Eva Balsa-Canto
  • Comunication 14 - MEWpy: Modelled by Man, designed by Nature | Authors: Vítor Pereira

13:00

Lunch Break

14:30

Companies Presentations

Anfiteatro CP2 B1

15:00

Networking Sessions

Anfiteatro CP2 B1

16:00

Round Table

Anfiteatro CP2 B1

17:15

End of the Day

17:30

Social Activities

19:00

Informal Dinner

Bar Carpe

Saturday, 5th

09:30

Workshops

  • Workshop 1: Machine and deep learning applied to protein sequences | Formador: Ana Marta Sequeira
  • Workshop 2: Single-cell RNA Sequencing - One cell at a time | Formadores: Ana Falcão, Mónica Fernandes, Diogo Macedo

12:00

End of the Day